{"id":604,"date":"2023-01-01T14:07:09","date_gmt":"2023-01-01T14:07:09","guid":{"rendered":"https:\/\/chemeng.iisc.ac.in\/telab\/?page_id=604"},"modified":"2023-01-03T04:46:39","modified_gmt":"2023-01-03T04:46:39","slug":"publications-2020","status":"publish","type":"page","link":"https:\/\/chemeng.iisc.ac.in\/telab\/?page_id=604","title":{"rendered":"Publications – 2020"},"content":{"rendered":"

[et_pb_section fb_built=”1″ fullwidth=”on” _builder_version=”4.18.0″ _module_preset=”default” global_colors_info=”{}”][et_pb_fullwidth_header title=”Publications” _builder_version=”4.18.0″ _module_preset=”default” title_font=”|700||on|||||” use_background_color_gradient=”on” background_color_gradient_direction=”90deg” background_color_gradient_stops=”#000000 0%|rgba(255,255,255,0) 99%” background_image=”https:\/\/chemeng.iisc.ac.in\/telab\/wp-content\/uploads\/2022\/10\/media1.jpg” background_blend=”multiply” custom_padding=”100px||100px||true|false” global_colors_info=”{}”][\/et_pb_fullwidth_header][\/et_pb_section][et_pb_section fb_built=”1″ admin_label=”2022″ _builder_version=”4.18.0″ _module_preset=”default” background_color=”#dddddd” global_colors_info=”{}”][et_pb_row _builder_version=”4.19.4″ _module_preset=”default” global_colors_info=”{}” locked=”off”][et_pb_column type=”4_4″ _builder_version=”4.19.4″ _module_preset=”default” global_colors_info=”{}”][et_pb_menu menu_id=”7″ active_link_color=”#E02B20″ _builder_version=”4.19.4″ _module_preset=”default” menu_font=”|600|||||||” menu_text_color=”#000000″ background_enable_color=”off” global_colors_info=”{}”][\/et_pb_menu][\/et_pb_column][\/et_pb_row][et_pb_row _builder_version=”4.18.0″ _module_preset=”default” global_colors_info=”{}”][et_pb_column type=”4_4″ _builder_version=”4.18.0″ _module_preset=”default” global_colors_info=”{}”][et_pb_text _builder_version=”4.19.4″ _module_preset=”default” border_width_bottom=”1px” global_colors_info=”{}”]<\/p>\n

Year 2020<\/h2>\n

[\/et_pb_text][\/et_pb_column][\/et_pb_row][et_pb_row column_structure=”1_3,2_3″ _builder_version=”4.19.4″ _module_preset=”default” background_color=”#FFFFFF” box_shadow_style=”preset2″ locked=”off” global_colors_info=”{}”][et_pb_column type=”1_3″ _builder_version=”4.19.4″ _module_preset=”default” custom_padding=”|||20px|false|false” global_colors_info=”{}”][et_pb_image src=”https:\/\/chemeng.iisc.ac.in\/telab\/wp-content\/uploads\/2023\/01\/images_medium_ci0c01291_0009.gif” title_text=”images_medium_ci0c01291_0009″ _builder_version=”4.19.4″ _module_preset=”default” global_colors_info=”{}”][\/et_pb_image][\/et_pb_column][et_pb_column type=”2_3″ _builder_version=”4.18.0″ _module_preset=”default” global_colors_info=”{}”][et_pb_text _builder_version=”4.19.4″ _module_preset=”default” text_font=”|600|||||||” custom_padding=”10px|20px|10px|20px|true|true” global_colors_info=”{}”]<\/p>\n

Concerted interactions between multiple gp41 trimers and the target cell lipidome may be required for HIV-1 entry.<\/p>\n

[\/et_pb_text][et_pb_blurb title=”Journal of Chemical Information and Modeling, 2020″ url=”https:\/\/pubs.acs.org\/doi\/pdf\/10.1021\/acs.jcim.0c01291″ use_icon=”on” font_icon=”||fa||400″ icon_color=”#FFFFFF” icon_placement=”left” image_icon_width=”12px” content_max_width=”100%” _builder_version=”4.19.4″ _module_preset=”default” header_font=”||||||||” header_text_color=”#FFFFFF” header_font_size=”14px” body_text_color=”#FFFFFF” background_color=”#0C71C3″ width=”100%” custom_padding=”20px|20px|20px|20px|true|true” global_colors_info=”{}”][\/et_pb_blurb][et_pb_text _builder_version=”4.19.4″ _module_preset=”default” global_colors_info=”{}”]<\/p>\n

Gorai, B., Sahoo, A. K., Srivastava, A., Dixit, N. M., & Maiti, P. K.<\/p>\n

[\/et_pb_text][et_pb_button button_url=”https:\/\/pubs.acs.org\/doi\/pdf\/10.1021\/acs.jcim.0c01291″ url_new_window=”on” button_text=”Link” button_alignment=”right” _builder_version=”4.19.4″ _module_preset=”default” custom_button=”on” button_text_size=”14px” button_text_color=”#FFFFFF” button_bg_color=”#0C71C3″ global_colors_info=”{}”][\/et_pb_button][\/et_pb_column][\/et_pb_row][et_pb_row column_structure=”1_3,2_3″ _builder_version=”4.19.4″ _module_preset=”default” background_color=”#FFFFFF” box_shadow_style=”preset2″ locked=”off” global_colors_info=”{}”][et_pb_column type=”1_3″ _builder_version=”4.19.4″ _module_preset=”default” custom_padding=”|||20px|false|false” global_colors_info=”{}”][\/et_pb_column][et_pb_column type=”2_3″ _builder_version=”4.18.0″ _module_preset=”default” global_colors_info=”{}”][et_pb_text _builder_version=”4.19.4″ _module_preset=”default” text_font=”|600|||||||” custom_padding=”10px|20px|10px|20px|true|true” global_colors_info=”{}”]<\/p>\n

Bistability in virus\u2013host interaction networks underlies the success of hepatitis C treatments.<\/p>\n

[\/et_pb_text][et_pb_blurb title=”In Phenotypic Switching (pp. 131-156). Academic Press, 2020″ url=”#” use_icon=”on” font_icon=”||fa||400″ icon_color=”#FFFFFF” icon_placement=”left” image_icon_width=”12px” content_max_width=”100%” _builder_version=”4.19.4″ _module_preset=”default” header_font=”||||||||” header_text_color=”#FFFFFF” header_font_size=”14px” body_text_color=”#FFFFFF” background_color=”#0C71C3″ width=”100%” custom_padding=”20px|20px|20px|20px|true|true” global_colors_info=”{}”][\/et_pb_blurb][et_pb_text _builder_version=”4.19.4″ _module_preset=”default” global_colors_info=”{}”]<\/p>\n

Padmanabhan, P., Raja, R., & Dixit, N. M.<\/p>\n

[\/et_pb_text][et_pb_button button_url=”#” url_new_window=”on” button_text=”Link” button_alignment=”right” _builder_version=”4.19.4″ _module_preset=”default” custom_button=”on” button_text_size=”14px” button_text_color=”#FFFFFF” button_bg_color=”#0C71C3″ global_colors_info=”{}”][\/et_pb_button][\/et_pb_column][\/et_pb_row][et_pb_row column_structure=”1_3,2_3″ _builder_version=”4.19.4″ _module_preset=”default” background_color=”#FFFFFF” box_shadow_style=”preset2″ locked=”off” global_colors_info=”{}”][et_pb_column type=”1_3″ _builder_version=”4.19.4″ _module_preset=”default” custom_padding=”|||20px|false|false” global_colors_info=”{}”][\/et_pb_column][et_pb_column type=”2_3″ _builder_version=”4.18.0″ _module_preset=”default” global_colors_info=”{}”][et_pb_text _builder_version=”4.19.4″ _module_preset=”default” text_font=”|600|||||||” custom_padding=”10px|20px|10px|20px|true|true” global_colors_info=”{}”]<\/p>\n

Transmitted HIV-1 is more pathogenic in heterosexual individuals than homosexual men.<\/p>\n

[\/et_pb_text][et_pb_blurb title=”medRxiv, 2020″ url=”https:\/\/www.medrxiv.org\/content\/10.1101\/2020.09.08.20191015v1.full.pdf” use_icon=”on” font_icon=”||fa||400″ icon_color=”#FFFFFF” icon_placement=”left” image_icon_width=”12px” content_max_width=”100%” _builder_version=”4.19.4″ _module_preset=”default” header_font=”||||||||” header_text_color=”#FFFFFF” header_font_size=”14px” body_text_color=”#FFFFFF” background_color=”#0C71C3″ width=”100%” custom_padding=”20px|20px|20px|20px|true|true” global_colors_info=”{}”][\/et_pb_blurb][et_pb_text _builder_version=”4.19.4″ _module_preset=”default” global_colors_info=”{}”]<\/p>\n

James, A., & Dixit, N. M.<\/p>\n

[\/et_pb_text][et_pb_button button_url=”https:\/\/www.medrxiv.org\/content\/10.1101\/2020.09.08.20191015v1.full.pdf” url_new_window=”on” button_text=”Link” button_alignment=”right” _builder_version=”4.19.4″ _module_preset=”default” custom_button=”on” button_text_size=”14px” button_text_color=”#FFFFFF” button_bg_color=”#0C71C3″ global_colors_info=”{}”][\/et_pb_button][\/et_pb_column][\/et_pb_row][et_pb_row column_structure=”1_3,2_3″ _builder_version=”4.19.4″ _module_preset=”default” background_color=”#FFFFFF” box_shadow_style=”preset2″ locked=”off” global_colors_info=”{}”][et_pb_column type=”1_3″ _builder_version=”4.19.4″ _module_preset=”default” custom_padding=”|||20px|false|false” global_colors_info=”{}”][et_pb_image src=”https:\/\/chemeng.iisc.ac.in\/telab\/wp-content\/uploads\/2023\/01\/Screenshot-2023-01-01-194507.jpg” title_text=”Screenshot 2023-01-01 194507″ _builder_version=”4.19.4″ _module_preset=”default” global_colors_info=”{}”][\/et_pb_image][\/et_pb_column][et_pb_column type=”2_3″ _builder_version=”4.18.0″ _module_preset=”default” global_colors_info=”{}”][et_pb_text _builder_version=”4.19.4″ _module_preset=”default” text_font=”|600|||||||” custom_padding=”10px|20px|10px|20px|true|true” global_colors_info=”{}”]<\/p>\n

The quantitative landscape of the neutralizing antibody response to SARS-CoV-2.<\/p>\n

[\/et_pb_text][et_pb_blurb title=”medRxiv, 2020″ url=”https:\/\/www.medrxiv.org\/content\/10.1101\/2020.09.25.20201996v1.full.pdf” use_icon=”on” font_icon=”||fa||400″ icon_color=”#FFFFFF” icon_placement=”left” image_icon_width=”12px” content_max_width=”100%” _builder_version=”4.19.4″ _module_preset=”default” header_font=”||||||||” header_text_color=”#FFFFFF” header_font_size=”14px” body_text_color=”#FFFFFF” background_color=”#0C71C3″ width=”100%” custom_padding=”20px|20px|20px|20px|true|true” global_colors_info=”{}”][\/et_pb_blurb][et_pb_text _builder_version=”4.19.4″ _module_preset=”default” global_colors_info=”{}”]<\/p>\n

Padmanabhan, P., Desikan, R., & Dixit, N. M.<\/p>\n

[\/et_pb_text][et_pb_button button_url=”https:\/\/www.medrxiv.org\/content\/10.1101\/2020.09.25.20201996v1.full.pdf” url_new_window=”on” button_text=”Link” button_alignment=”right” _builder_version=”4.19.4″ _module_preset=”default” custom_button=”on” button_text_size=”14px” button_text_color=”#FFFFFF” button_bg_color=”#0C71C3″ global_colors_info=”{}”][\/et_pb_button][\/et_pb_column][\/et_pb_row][et_pb_row column_structure=”1_3,2_3″ _builder_version=”4.19.4″ _module_preset=”default” background_color=”#FFFFFF” box_shadow_style=”preset2″ locked=”off” global_colors_info=”{}”][et_pb_column type=”1_3″ _builder_version=”4.19.4″ _module_preset=”default” custom_padding=”|||20px|false|false” global_colors_info=”{}”][et_pb_image src=”https:\/\/chemeng.iisc.ac.in\/telab\/wp-content\/uploads\/2023\/01\/pcbi.1008064.g001.png” title_text=”pcbi.1008064.g001″ _builder_version=”4.19.4″ _module_preset=”default” global_colors_info=”{}”][\/et_pb_image][\/et_pb_column][et_pb_column type=”2_3″ _builder_version=”4.18.0″ _module_preset=”default” global_colors_info=”{}”][et_pb_text _builder_version=”4.19.4″ _module_preset=”default” text_font=”|600|||||||” custom_padding=”10px|20px|10px|20px|true|true” global_colors_info=”{}”]<\/p>\n

Early exposure to broadly neutralizing antibodies may trigger a dynamical switch from progressive disease to lasting control of SHIV infection.<\/p>\n

[\/et_pb_text][et_pb_blurb title=” PLoS computational biology, 16(8), e1008064., 2020″ url=”https:\/\/journals.plos.org\/ploscompbiol\/article?id=10.1371\/journal.pcbi.1008064″ use_icon=”on” font_icon=”||fa||400″ icon_color=”#FFFFFF” icon_placement=”left” image_icon_width=”12px” content_max_width=”100%” _builder_version=”4.19.4″ _module_preset=”default” header_font=”||||||||” header_text_color=”#FFFFFF” header_font_size=”14px” body_text_color=”#FFFFFF” background_color=”#0C71C3″ width=”100%” custom_padding=”20px|20px|20px|20px|true|true” global_colors_info=”{}”][\/et_pb_blurb][et_pb_text _builder_version=”4.19.4″ _module_preset=”default” global_colors_info=”{}”]<\/p>\n

Desikan, R., Raja, R., & Dixit, N. M.<\/p>\n

[\/et_pb_text][et_pb_button button_url=”https:\/\/journals.plos.org\/ploscompbiol\/article?id=10.1371\/journal.pcbi.1008064″ url_new_window=”on” button_text=”Link” button_alignment=”right” _builder_version=”4.19.4″ _module_preset=”default” custom_button=”on” button_text_size=”14px” button_text_color=”#FFFFFF” button_bg_color=”#0C71C3″ global_colors_info=”{}”][\/et_pb_button][\/et_pb_column][\/et_pb_row][et_pb_row column_structure=”1_3,2_3″ _builder_version=”4.19.4″ _module_preset=”default” background_color=”#FFFFFF” box_shadow_style=”preset2″ locked=”off” global_colors_info=”{}”][et_pb_column type=”1_3″ _builder_version=”4.19.4″ _module_preset=”default” custom_padding=”|||20px|false|false” global_colors_info=”{}”][et_pb_image src=”https:\/\/chemeng.iisc.ac.in\/telab\/wp-content\/uploads\/2023\/01\/41745_2020_211_Fig1_HTML.webp” title_text=”41745_2020_211_Fig1_HTML” _builder_version=”4.19.4″ _module_preset=”default” global_colors_info=”{}”][\/et_pb_image][\/et_pb_column][et_pb_column type=”2_3″ _builder_version=”4.18.0″ _module_preset=”default” global_colors_info=”{}”][et_pb_text _builder_version=”4.19.4″ _module_preset=”default” text_font=”|600|||||||” custom_padding=”10px|20px|10px|20px|true|true” global_colors_info=”{}”]<\/p>\n

City-Scale Agent-Based Simulators for the Study of Non-Pharmaceutical Interventions in the Context of the COVID-19 Epidemic.<\/span><\/p>\n

[\/et_pb_text][et_pb_blurb title=”Journal of the Indian Institute of Science, 1-39., 2020″ url=”https:\/\/link.springer.com\/content\/pdf\/10.1007\/s41745-020-00211-3.pdf” use_icon=”on” font_icon=”||fa||400″ icon_color=”#FFFFFF” icon_placement=”left” image_icon_width=”12px” content_max_width=”100%” _builder_version=”4.19.4″ _module_preset=”default” header_font=”||||||||” header_text_color=”#FFFFFF” header_font_size=”14px” body_text_color=”#FFFFFF” background_color=”#0C71C3″ width=”100%” custom_padding=”20px|20px|20px|20px|true|true” global_colors_info=”{}”][\/et_pb_blurb][et_pb_text _builder_version=”4.19.4″ _module_preset=”default” global_colors_info=”{}”]<\/p>\n

Agrawal, S., Bhandari, S., Bhattacharjee, A., Deo, A., Dixit, N. M., Harsha, P., … & Yasodharan, S.<\/span><\/p>\n

[\/et_pb_text][et_pb_button button_url=”https:\/\/link.springer.com\/content\/pdf\/10.1007\/s41745-020-00211-3.pdf” url_new_window=”on” button_text=”Link” button_alignment=”right” _builder_version=”4.19.4″ _module_preset=”default” custom_button=”on” button_text_size=”14px” button_text_color=”#FFFFFF” button_bg_color=”#0C71C3″ global_colors_info=”{}”][\/et_pb_button][\/et_pb_column][\/et_pb_row][et_pb_row column_structure=”1_3,2_3″ _builder_version=”4.19.4″ _module_preset=”default” background_color=”#FFFFFF” box_shadow_style=”preset2″ locked=”off” global_colors_info=”{}”][et_pb_column type=”1_3″ _builder_version=”4.19.4″ _module_preset=”default” custom_padding=”|||20px|false|false” global_colors_info=”{}”][et_pb_image src=”https:\/\/chemeng.iisc.ac.in\/telab\/wp-content\/uploads\/2023\/01\/pcbi.1008434.g001.png” title_text=”pcbi.1008434.g001″ _builder_version=”4.19.4″ _module_preset=”default” global_colors_info=”{}”][\/et_pb_image][\/et_pb_column][et_pb_column type=”2_3″ _builder_version=”4.18.0″ _module_preset=”default” global_colors_info=”{}”][et_pb_text _builder_version=”4.19.4″ _module_preset=”default” text_font=”|600|||||||” custom_padding=”10px|20px|10px|20px|true|true” global_colors_info=”{}”]<\/p>\n

Pre-existing resistance in the latent reservoir can compromise VRC01 therapy during chronic HIV-1 infection.<\/span><\/p>\n

[\/et_pb_text][et_pb_blurb title=”PLOS Computational Biology, 16(11), e1008434.” url=”https:\/\/journals.plos.org\/ploscompbiol\/article?id=10.1371\/journal.pcbi.1008434″ use_icon=”on” font_icon=”||fa||400″ icon_color=”#FFFFFF” icon_placement=”left” image_icon_width=”12px” content_max_width=”100%” _builder_version=”4.19.4″ _module_preset=”default” header_font=”||||||||” header_text_color=”#FFFFFF” header_font_size=”14px” body_text_color=”#FFFFFF” background_color=”#0C71C3″ width=”100%” custom_padding=”20px|20px|20px|20px|true|true” global_colors_info=”{}”][\/et_pb_blurb][et_pb_text _builder_version=”4.19.4″ _module_preset=”default” global_colors_info=”{}”]<\/p>\n

Saha, A., & Dixit, N. M.<\/span><\/p>\n

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Targeting TMPRSS2 and Cathepsin B\/L together may be synergistic against SARS-CoV-2 infection.<\/span><\/p>\n

[\/et_pb_text][et_pb_blurb title=”PLoS computational biology, 16(12), e1008461., 2020″ url=”https:\/\/journals.plos.org\/ploscompbiol\/article?id=10.1371\/journal.pcbi.1008461″ use_icon=”on” font_icon=”||fa||400″ icon_color=”#FFFFFF” icon_placement=”left” image_icon_width=”12px” content_max_width=”100%” _builder_version=”4.19.4″ _module_preset=”default” header_font=”||||||||” header_text_color=”#FFFFFF” header_font_size=”14px” body_text_color=”#FFFFFF” background_color=”#0C71C3″ width=”100%” custom_padding=”20px|20px|20px|20px|true|true” global_colors_info=”{}”][\/et_pb_blurb][et_pb_text _builder_version=”4.19.4″ _module_preset=”default” global_colors_info=”{}”]<\/p>\n

Padmanabhan, P., Desikan, R., & Dixit, N. M.<\/span><\/p>\n

[\/et_pb_text][et_pb_button button_url=”https:\/\/journals.plos.org\/ploscompbiol\/article?id=10.1371\/journal.pcbi.1008461″ url_new_window=”on” button_text=”Link” button_alignment=”right” _builder_version=”4.19.4″ _module_preset=”default” custom_button=”on” button_text_size=”14px” button_text_color=”#FFFFFF” button_bg_color=”#0C71C3″ global_colors_info=”{}”][\/et_pb_button][\/et_pb_column][\/et_pb_row][\/et_pb_section]<\/p>\n","protected":false},"excerpt":{"rendered":"

Year 2020Concerted interactions between multiple gp41 trimers and the target cell lipidome may be required for HIV-1 entry.Gorai, B., Sahoo, A. K., Srivastava, A., Dixit, N. M., & Maiti, P. K.Bistability in virus\u2013host interaction networks underlies the success of hepatitis C treatments.Padmanabhan, P., Raja, R., & Dixit, N. M.Transmitted HIV-1 is more pathogenic in heterosexual […]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_et_pb_use_builder":"on","_et_pb_old_content":"","_et_gb_content_width":"","om_disable_all_campaigns":false},"_links":{"self":[{"href":"https:\/\/chemeng.iisc.ac.in\/telab\/index.php?rest_route=\/wp\/v2\/pages\/604"}],"collection":[{"href":"https:\/\/chemeng.iisc.ac.in\/telab\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/chemeng.iisc.ac.in\/telab\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/chemeng.iisc.ac.in\/telab\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/chemeng.iisc.ac.in\/telab\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=604"}],"version-history":[{"count":13,"href":"https:\/\/chemeng.iisc.ac.in\/telab\/index.php?rest_route=\/wp\/v2\/pages\/604\/revisions"}],"predecessor-version":[{"id":882,"href":"https:\/\/chemeng.iisc.ac.in\/telab\/index.php?rest_route=\/wp\/v2\/pages\/604\/revisions\/882"}],"wp:attachment":[{"href":"https:\/\/chemeng.iisc.ac.in\/telab\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=604"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}